sc_toolbox.plot.cluster_composition_stacked_barplot

sc_toolbox.plot.cluster_composition_stacked_barplot(relative_frequencies, xlabel='name', figsize=(6, 10), width=0.8, order=None, error_bar=None, label_size=15, tick_size=13, capsize=None, margins=(0.02, 0.04), colors=None, save=None)

Plot relative frequencies as a stacked barplot.

Parameters:

• relative_frequencies (DataFrame) – Data frame containing relative Frequencies as calculated by calc_relFreq()

• xlabel (str) – x-axis label

• figsize (Tuple[int, int]) – Size of the figure as specified in matplotlib

• width (float) – Width of the bars

• order – Order of x-axis labels from left to right

• error_bar – Set to True to add error bars (only possible when grouping the frequencies)

• tick_size (int) – Size of the ticks as specified in matplotlib

• label_size (int) – Size of the labels as specified in matplotlib

• capsize (Optional[int]) – Size of the horizontal lines of the error bar

• margins (Tuple[float, float]) – Change margins of the plot if desired

• colors – List of colors to use for the bands

• save (Optional[str]) – Path to save the plot to

Example